Theoretical Molecular Biophysics

Statistical Mechanics of Biopolymers.- Random Walk Models for the Conformation.- Flory–Huggins Theory for Biopolymer Solutions.- Protein Electrostatics and Solvation.- Implicit Continuum Solvent Models.- Debye–Hückel Theory.- Protonation Equilibria.- Reaction Kinetics.- Formal Kinetics.- Kinetic Theory: Fokker–Planck Equation.- Kramers’ Theory.- Dispersive Kinetics.- Transport Processes.- Nonequilibrium Thermodynamics.- Simple Transport Processes.- Ion Transport Through a Membrane.- Reaction–Diffusion Systems.- Reaction Rate Theory.- Equilibrium Reactions.- Calculation of Reaction Rates.- Marcus Theory of Electron Transfer.- Elementry Photophysis.- Molecular States.- Optical Transitions.- The Displaced Harmonic Oscillator Model.- Spectral Diffusion.- Crossing of Two Electronic States.- Dynamics of an Excited State.- Elementry Photoinduced Processes.- Photophysics of Chlorophylls and Carotenoids.- Incoherent Energy Transfer.- Coherent Excitations in Photosynthetic Systems.- Ultrafast Electron Transfer Processes in the Photosynthetic Reaction Center.- Proton Transfer in Biomolecules.- Molecular Motor Models.- Continuous Ratchet Models.- Discrete Ratchet Models.- The Grand Canonical Ensemble.- Time Correlation Function of the Displaced Harmonic Oscillator Model.- The Saddle Point Method.