Protein Supersecondary Structures

Recent Advances in Computational Prediction of Secondary and Supersecondary Structures from Protein Sequences.- Complementary Packing of -Helices Revisited.- The 3D Invariant Positioning for Protein Molecules / Molecular Complexes with Matching Subunits.- Beta Sandwich-Like Folds: Sequences, Contacts, Classification of Invariant Substructures and Beta Sandwich Protein Grammar.- Conformational Variability Prediction of Influenza Virus Hemagglutinins with Amino Acid Mutations Using Supersecondary Structure Code.- Statistical Analysis of Walker-A Motif-Containing beta- -beta Supersecondary Structures in the Protein Data Bank.- Discovery and Analysis of Repeat and Low-Complexity Architectures in Proteins and Their Conserved Evolutionary Relationships Using Self-Homology Dot Plots.- Advances in Prediction of Post-Translational Modification Sites Known to Localize in Protein Supersecondary Structures.- Prediction of the Stability of Protein Substructures Using AI/ML Techniques.- Leveraging Artificial Intelligence in GPCR Activation Studies: Computational Prediction Methods as Key Drivers of Knowledge.- Techniques For Bioinformatic Applications in Protein Dynamics.- Quantifying Protein-Nucleic Acid Interactions for Engineering Useful CRISPR-Cas9 Genome-Editing Variants.- Building Up Functional Coiled Coil-Based Supramolecular Assemblies for Biomedical and Biotechnological Applications.- Mean-Field Coupling Between Local Interactions in Proteins in Relation to Chirality, Secondary and Supersecondary Structure Formation, and Allostery.- Graph-Theoretical Prediction and Analysis of Biologically Relevant Substructures in an Open and Closed Conformation of Respiratory Complex I.- The Role of Protonation in the PfMATE Transporter Protein Structural Transitions.- Secondary Structure Detection and Structure Modeling for Cryo-EM.- Hierarchical Analysis of Protein Structures: From Secondary Structures to Protein Units and Domains.- Ig or Not Ig? That is the Question: The Nucleating Supersecondary Structure of the Ig-Fold and the Extended Ig Universe.