Mass Spectrometry-Based Proteomics

lt;p>1. Increasing the Overall Proteome Coverage by Combining Protein Digestion by Tryp-N and Trypsin

            Jade I. Hawksworth, Lode Denolf, Evy Timmerman, and Kris Gevaert

2. Cell Surface Biotinylation Using Furan Crosslinking Chemistry

            Esperanza Fernandez, Laia Miret-Casals, Annemieke Madder, and Kris Gevaert

3. Studying Cellular Dynamics Using Proximity-Dependent Biotinylation: Somatic Cell Reprogramming

            Reuben Samson, Francesco Zangari, and Anne-Claude Gingras

4. Virotrap: Trapping Protein Complexes in Virus-Like Particles

            George D. Moschonas, Margaux De Meyer, Delphine De Sutter, Evy Timmerman, Petra Van Damme, and Sven Eyckerman

5. Thermal Proteome Profiling for Drug Target Identification and Probing of Protein States

            Patricia Sauer and Marcus Bantscheff

6. Improved Coverage of the N-Terminome by Combining ChaFRADIC with Alternative Proteases

            Xuehui Jiang, Ying Lao, Victor Spicer, and René P. Zahedi

7. Sensitive and High-Throughput Exploration of Protein N Termini by TMT-TAILS N-Terminomics

            Konstantinos Kalogeropoulos, Louise Bundgaard, and Ulrich auf dem Keller

8. The Global Acetylation Profiling Pipeline for Quick Assessment of Protein N-Acetyltransferase Specificity In Cellulo

            Thierry Meinnel, Jean-Baptiste Boyer, and Carmela Giglione

9. Systems-Wide Site-Specific Analysis of Glycoproteins

            Kathirvel Alagesan and Emmanuelle Charpentier

10. Targeted Profiling of Protein Phosphorylation in Plants

            Xiangyu Xu, Kris Gevaert, Ive De Smet, and Lam Dai Vu

11. Automated Sample Preparation for Mass Spectrometry-Based Clinical Proteomics

            Torsten Müller, Mauro A. Cremonini, Georg Kliewer, and Jeroen Krijgsveld

12. Proteomics-Based Analysis and Diagnosis of Formalin-Fixed Paraffin-Embedded Amyloidosis Samples

            Delphi Van Haver, Amélie Dendooven, and Francis Impens

13. A Robust and Clinically-Applicable Sample Preparation Protocol for Urinary Extracellular Vesicle Isolation Suitable for Mass Spectrometry-Based Proteomics

            Leyla A. Erozenci, Irene V. Bijnsdorp, Sander R. Piersma, and Connie R. Jimenez

14. Density-Based Fractionation of Cell Conditioned Medium to Prepare Proteomics Grade Extracellular Vesicles

            Quentin Roux, Sarah Deville, and An Hendrix

15. Mass Spectrometry-Based Analysis of Histone Post-Translational Modifications from Laser Microdissected Samples

            Roberta Noberini and Tiziana Bonaldi

16. Phosphoproteomics after Guanidinium Thiocyanate Extraction of Tissue Biopsies

            Frank Rolfs, Richard R. de Goeij-de Haas, Jaco C. Knol, Sander R. Piersma, and Connie R. Jimenez

17. Probing Antibody Structures by Hydrogen/Deuterium Exchange Mass Spectrometry

            Zuzana Kalaninová, Lukás Fojtík, Josef Chmelík, Petr Novák, Michael Volný, and Petr Man