PCR Guru

Ayaz was born in Baku, Azerbaijan. He obtained his BSc and MSc degrees in Molecular Biology and Genetics from Bosphorus University, Istanbul, Turkey and got a 2-year training in Biochemistry as an intern at Baylor College of Medicine, Houston, Texas, USA. Ayaz pursued his PhD in Biochemistry at MRC Protein Phosphorylation Unit at Dundee University, Scotland, UK in Prof. Dario Alessi’s lab. Ayaz is currently a postdoctoral fellow in Prof. Junying Yuan’s lab at Harvard Medical School, Cell Biology Department. Gerta was born in Fier, Albania. She obtained her BSc degrees in Molecular Biology and Genetics, as well as a second major in Chemistry from Bosphorus University, Istanbul, Turkey. Gerta pursued her PhD in Biochemistry at MRC Protein Phosphorylation Unit at Dundee University, Scotland, UK in Prof. Carol MacKintosh’s lab. Gerta is currently a postdoctoral fellow in Prof. Brendan Mannings’s lab at Harvard T.H. Chan School of Public Health, Department of Genetics and Complex Diseases.

1. Introduction2. Procedure3. Good PCR Practices4. Troubleshooting5. Tips6. Special CasesAppendix A. Agarose Gel Electrophoresis ProtocolAppendix B. Silver Staining of DNA GelsAppendix C. Plasmid Miniprep ProtocolAppendix D. Restriction Enzyme Digestion ProtocolAppendix E. Protocol for DNA Concentration Estimation by using Hoechst 33258Appendix F. FormulasAppendix G. Primers for Common Promoters, Housekeeping Genes, Reporters, etc.Appendix H. TagsAppendix I. Thermostable DNA polymerasesAppendix J. Example of a Daily PCR LogAppendix K. Common Buffers and SolutionsAppendix L. Useful numbersAppendix M. Yeast colony PCR