Protein Supersecondary Structures

Super-secondary Structure: A Historical Perspective.-Hierarchical Representation of Super-secondary Structures Using a Graph-theoretical Approach.-Up, Down and Around: Identifying Recurrent Interactions Within and Between Super Secondary Structures in b-Propellers.-Structure Description and Identification using the Tableau Representation of Protein Folding Patterns.-Computational Prediction of Secondary and Supersecondary Structures.-A Survey of Machine Learning Methods for Secondary and Supersecondary Protein Structure Prediction.-Beyond Supersecondary Structure: The Global Properties of Protein Sequences.-Creating Supersecondary Structures with BuildBeta.-A Modular Perspective of Protein Structures; Application to Fragment Based Loop Modeling.-Residue-residue Contacts: Application to Analysis of Secondary Structure Interactions.-Super-secondary Structures and Modeling of Protein Folds.-Computational Simulations of Protein Folding to Engineer Amino Acid Sequences to Encourage Desired Supersecondary Structure Formation.-Protein Folding at Atomic Resolution: Analysis of Autonomously Folding Supersecondary Structure Motifs by Nuclear Magnetic Resonance.-Artificial Supersecondary Structures Based on Aromatic Oligoamides.-Cross-b-sheet Super-secondary Structure in Amyloid Folds: Techniques for Detection and Characterization.-Analyzing Oligomerization of Individual Transmembrane Helices and of Entire Membrane Proteins in : A Hitchhiker´s Guide to GALLEX.-Super-secondary Structure Prediction of Transmembrane Beta-Barrel Proteins.-Functional Structural Motifs for Protein-ligand, Protein-protein and Protein-nucleic Acid Interactions and their Connection to Supersecondary Structures.