Homology Modeling

Classification of Proteins: Available Structural Space for MolecularModelling.-Effective Techniques for Protein Structure Mining.-Methods for Sequence-structure Alignment.-Force Fields for Homology Modeling.-Automated Protein Structure Modeling with SWISS-MODEL Workspace and the Protein Model Portal.-A Practical Introduction to Molecular Dynamics Simulations: Applications to Homology Modeling.-Methods for Accurate Homology Modeling by Global Optimization.-Ligand-Guided Receptor Optimization.-Loop Simulations.-Methods of Protein Structure Comparison.- Homology Modeling of Class A G Protein-Coupled Receptors.-Homology Modeling of Transporter Proteins (Carriers and Ion Channels).-Methods for the Homology Modeling of Antibody Variable Regions.-Investigating Protein Variants using Structural Calculation Techniques.-Macromolecular Assembly Structures by Comparative Modeling and Electron Microscopy.-Preparation and Refinement of Model Protein-Ligand Complexes.-Modeling Peptide-protein Interactions.-Comparison of Common Homology Modeling Algorithms: Application of User-defined Alignments.