Comparative Genomics

Classifying the Post-Duplication Fate of Paralogous Genes.- Inferring clusters of orthologous and paralogous transcripts.- On the class of double distance problems.- The Floor is Lava - Halving Genomes with Viaducts, Piers and Pontoons.- Two strikes against the phage recombination problem.- Physical mapping of two nested fixed inversions in the X chromosome of the malaria mosquito Anopheles messeae.- Gene order phylogeny via ancestral genome reconstruction under Dollo.- Prior Density Learning in Variational Bayesian Phylogenetic Parameters Inference.- The Asymmetric Cluster Affinity Cost.- The k-RF Measures for Labeled Trees.- Bounding the Number of Reticulations in a Tree-Child Network That Displays a Set of Trees.- Finding agreement cherry-reduced subnetworks in level-1 networks.- CONSULT-II: Taxonomic identification using Locality Sensitive Hashing.- MAGE: Strain Level Profiling of Metagenome Samples.- MoTERNN: Classifying the Mode of Cancer Evolution Using Recursive Neural Networks.