Fault-Tolerant Digital Microfluidic Biochips (eBook)

Compilation and Synthesis
eBook Download: PDF
2015 | 1st ed. 2016
XII, 234 Seiten
Springer International Publishing (Verlag)
978-3-319-23072-6 (ISBN)

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Fault-Tolerant Digital Microfluidic Biochips - Paul Pop, Mirela Alistar, Elena Stuart, Jan Madsen
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This book describes for researchers in the fields of compiler technology, design and test, and electronic design automation the new area of digital microfluidic biochips (DMBs), and thus offers a new application area for their methods.  The authors present a routing-based model of operation execution, along with several associated compilation approaches, which progressively relax the assumption that operations execute inside fixed rectangular modules.  Since operations can experience transient faults during the execution of a bioassay, the authors show how to use both offline (design time) and online (runtime) recovery strategies. The book also presents methods for the synthesis of fault-tolerant application-specific DMB architectures.

·         Presents the current models used for the research on compilation and synthesis techniques of DMBs in a tutorial fashion;

·         Includes a set of 'benchmarks', which are presented in great detail and includes the source code of most of the techniques presented, including solutions to the basic compilation and synthesis problems;

·         Discusses several new research problems in detail, using numerous examples.



Paul Pop is has joined DTU Compute as an associate professor in May 2006. Previously, he was an assistant professor at Linköping University, Sweden, where he has received his Ph.D. in Computer Systems in 2003. Paul's research is about methods for systems engineering: modeling, analysis, simulation and optimization. Systems engineering is the treatment of engineering design as a decision making-process. He has applied systems engineering methods in the design of embedded systems, which are special-purpose computer systems dedicated to perform a specific function.

Paul Pop is has joined DTU Compute as an associate professor in May 2006. Previously, he was an assistant professor at Linköping University, Sweden, where he has received his Ph.D. in Computer Systems in 2003. Paul’s research is about methods for systems engineering: modeling, analysis, simulation and optimization. Systems engineering is the treatment of engineering design as a decision making-process. He has applied systems engineering methods in the design of embedded systems, which are special-purpose computer systems dedicated to perform a specific function.

Introduction.- Biochips: technologies and trends.- Digital microfluidic biochips.- Biochip architecture models.- Biochemical application programming and applications models.- Design methodology: the compilation and synthesis problems.- State-of-the-art research on compilation and synthesis.- Module-based compilation with reconfigurable operation execution.- Routing-based compilation.- Compilation for error recovery.- Synthesis of fault-tolerant architectures.- Synthesis of application-specific architectures.- Benchmarks and evaluation.- Conclusions and future work directions.

Erscheint lt. Verlag 7.9.2015
Zusatzinfo XII, 234 p. 109 illus., 82 illus. in color.
Verlagsort Cham
Sprache englisch
Themenwelt Technik Bauwesen
Technik Elektrotechnik / Energietechnik
Schlagworte Biochip Architecture • Biochip Compilation and Synthesis • biochips • Digital Microfluidic Biochips • Fault-tolerant Biochips
ISBN-10 3-319-23072-7 / 3319230727
ISBN-13 978-3-319-23072-6 / 9783319230726
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