Intermediate Filament Associated Proteins

Department of Cell Biology, The Johns Hopkins University School of Medicine, USA Department of Cell Biology, The Netherlands Cancer Institute, The Netherlands

Part I: Identification and Biochemical Analysis of Lamin-Associated Proteins
1. BioID Identification of Lamin-Associated Proteins
Aaron A. Mehus, Ruthellen H. Anderson and Kyle J. Roux
2. Proximity-Dependent Biotin Identification (BioID) in Dictyostelium Amoebae
Petros Batsios, Irene Meyer and Ralph Gräf
3. Purification and Structural Analysis of LEM-Domain Proteins
Isaline Herrada, Benjamin Bourgeois, Camille Samson, Brigitte Buendia, Howard J Worman and Sophie Zinn-Justin
4. Purification and Structural Analysis of SUN and KASH Domain Proteins
F. Esra Demircioglu, Victor E. Cruz and Thomas U. Schwartz
5. Purification of Lamins and Soluble Fragments of NETs
Alexandr A. Makarov, Andrea Rizzotto, Peter Meinke and Eric C. Schirmer
6. Simple Separation of Functionally-Distinct Populations of Lamin-Binding Proteins
Jason M. Berk and Katherine L. Wilson
Part II: General Methods for Analysis of Intermediate Filament-Associated Proteins
7. Development of a Novel Green Fluorescent Protein-Based Binding Assay to Study the Association of Plakins with Intermediate Filament Proteins
Bertrand Favre, Nadja Begré, Jamal-Eddine Bouameur, and Luca Borradori
8. Functional Analysis of Keratin-Associated Proteins in Intestinal Epithelia: Heat-  Shock Protein Chaperoning and Kinase Rescue
Anastasia Mashukova, Radia Forteza and Pedro J. Salas
9. Purification of Protein Chaperones and their Functional Assays with Intermediate Filaments
Ming Der Perng, Yu-Shan Huang and Roy A. Quinlan
10. Purification and Structural Analysis of Plectin and BPAG1e
José A Manso, Inés García Rubio, María Gómez-Hernández, Esther Ortega, Rubén M  Buey, Ana M Carballido, Arturo Carabias, Noelia Alonso-García and José M de Pereda
11. Purification and Structural Analysis of Desmoplakin
Hee-Jung Choi and William I. Weis
12. Degradation of the Intermediate Filament Family by Gigaxonin
Pascale Bomont
Part III: Functional and Genetic Analysis of the Plakin and Other Cytoskeletal Cross-Linkers
13. Functional and Genetic Analysis of Plectin in Skin And Muscle
Günther A. Rezniczek, Lilli Winter, Gernot Walko, and Gerhard Wiche
14. Functional and Genetic Analysis of Epiplakin in Epithelial Cells
Sandra Szabo, Karl L. Wögenstein and Peter Fuchs
15. In Vitro Model of the Epidermis: Connecting Protein Function to 3D Structure
Christopher Arnette,Jennifer L. Koetsier, Paul Hoover, Spiro Getsios and Kathleen J.     Green
16. Functional Analysis of Periplakin and Envoplakin, Cytoskeletal Linkers and Cornified Envelope Precursor Proteins
Veronika Boczonadi and Arto Määttä
17. Microtubule-Actin Crosslinking Factor 1: Domains, Interaction Partners and Tissue-Specific Functions
Dmitry Goryunov and Ronald K. H. Liem
18. Functional and Genetic Analysis of Neuronal Isoforms of BPAG1
 Anisha Lynch-Godrei and Rashmi Kothary
19. "Functional and Genetic Analysis of Spectraplakins in Drosophila”
Ines Hahn, Matthew Ronshaugen, Natalia Sánchez-Soriano and Andreas Prokop
20. Functional and Genetic Analysis of VAB-10 Spectraplakin in C. Elegans
Christelle Gally, Huimin Zhang and Michel Labouesse
Part IV: Functional and Genetic Analysis of Lamin-associated proteins
21. Tagged Chromosomal Insertion Site (TCIS) System, a Method to Study Lamina  Associated Chromatin
Jennifer C. Harr and Karen L. Reddy
22. Lamin Binding Proteins in Caenorhabditis Elegans
Agnieszka Dobrzynska, Peter Askjaer and Yosef Gruenbaum
23. Pathologically-Relevant Prelamin A Interactions with Transcription Factors
Arantza Infante and Clara I. Rodríguez
24. MCLIP Detection of Novel Protein-Protein Interactions at the Nuclear Envelope
Mohammed Hakim Jafferali, Ricardo A. Figueroa and Einar Hallberg
25. Preparation of the Human Cytomegalovirus Nuclear Egress Complex and Associated Proteins
Mayuri Sharma, Jeremy P. Kamil and Donald M. Coen