Systems Biology and Biotechnology of Escherichia coli (eBook)

1 Biological Features and Biotechnological Applications of Escherichia coli B: 'Is B for better?!'; 2 Escherichia coli Genome Engineering and Minimization for the Construction of a Bioengine; 3 Multi-omics Data-driven Systems Biology of E. coli; 4 A Medium-Throughput Structural Proteomics Approach Applied to the Genome of E. coli; 5 Resources for Escherichia coli Systems Biology; 6 The Multiple Scientific Disciplines Served by EcoCyc; 7 Analysis of E. coli Network; 8 Sensory Transduction Network of E. coli; 9 Genome-Scale Reconstruction, Modeling, and Simulation of E. coli’s Metabolic Network; 10 Kinetic Modeling of E.coli Enzymes: Integration of in vitro Experimental Data; 11 Dynamic Modeling of the Central Metabolism of E. coli – Linking Metabolite and Regulatory Networks; 12 Genome-scale Models and the Genetic Basis for E. coli Adaptation; 13 Organisation of Complex Escherichia coli Promoters; 14 Plasmid Regulation and Systems-Level Effects on Escherichia coli Metabolism; 15 Systems-level analysis of protein quality in inclusion body-forming Escherichia coli cells; 16 Mechanistic Challenges and Engineering Applications of Protein Export in E. coli; 17 Engineering E. coli Central Metabolism for Enhanced Primary Metabolite Production; 18 Glucose and Acetate Metabolism in E. coli - System Level Analysis and Biotechnological Applications in Protein Production Processes; 19 Performance Characteristics for Sensors and Circuits Used to Program E.coli; 20 Systems Metabolic Engineering of E. coli; Index