Proteogenomics

De Novo Sequencing of Peptides from Tandem Mass Spectra and Applications in Proteogenomics.- Genome Annotation.- Comprehensive Peptide Mapping is Crucial for Proteogenomics and Proteomics.- A Review of Protein Inference.- From Gene to Whole Cell: Modelling, Visualization, and Analysis.- Introduction to Integrated Proteogenomic Pipeline for Dealing with Pathogenic Missense SNPs.- Discovering Novel Proteoforms using Proteogenomic Workflows within the Galaxy Bioinformatics Platform.- Comparative Proteomics of Bacteria under Stress Conditions.- The Functional Comparison of Eukaryotic Proteomes: Implications for Choosing an Appropriate Model Organism to Probe Human Biology.- Sample Preparation for Proteogenomics of Aquatic Invertebrates.- Proteogenomics for Non-Model Ocean-Derived Fungi.- Deciphering Cancer Complexity: Integrative Proteogenomics and Proteomics Approaches for Biomarker Discovery.- Biomarker Discovery via N-Glycoproteomics.- Proteogenomic Approaches for Diseasome Studies.- Comparative Proteogenomic Approaches for Mapping the Global Proteome of the Unsequenced Leishmania Vector Phlebotomus papatasi.- A Proteogenomic Approach for the Identification of Virulence Factors in Leishmania Parasites.- Moving Toward Metaproteogenomics: A Computational Perspective on Analyzing Microbial Samples via Proteogenomics.- Evaluation of Eukaryotic mRNA Coding Potential.